Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939690.1_cds_XP_016484189.1_75227
CDS Infomation

[gene=LOC107804772] [db_xref=GeneID:107804772] [protein=putative nuclear RNA export factor SDE5] [protein_id=XP_016484189.1] [location=join(22377..22995,23415..23440,24310..24387,25351..25421,25550..25800,26328..26413,26583..26639,27171..27238,27332..27432,27508..27575,28618..28743)] [gbkey=CDS]
Sequence

ATGAAGATGGAAGCACCTCCAACAGTTTTGTTTACTGATGATGATAGAAAGAACCTGGAG
CAGTTGCTTGATGTCTTTGGACGTGTTGTCTCTCTTGATGACATTGCTGCAGCTTATTGT
AAAGCAGGTCGGGATCCAACTATTGCGNTTATTGCAGGTGATATACTTGGAGATCTGCAA
GCTAGCACCTCTATAACTACTACCTCTGCATCAGAAGAAAAAATAGAGGATTCTTTGACA
TTGACTTCTGAATCCGAATTTGAGGAAGTAGGAGATTCTGTGACATTAACTTCTGAATCT
GCATCTGATATTCATGCCAAGAGAGCTGGTCCCAGTTCATCAAAGCAAAAAAAGTTATCA
GTGTCTATGGGGACTGTCTCAAGCATGATCCCAAGAGACTATGTGACAAATAGGCCACTC
ATTCCAGAAACTTCTACGAGAATCAAGCCACTGAAATTAAGTGTGGATGATTTTTTTACC
TCAGAGATAAGGGATGAGAAAGCTCCATTAGGTGCTGCCGCTATGAGTGAAACCCTGCCA
GGCAGTGTTGAGGAGTTCCTCTTCAAAATGCTCGGAGATCGATTCTCTCTTGACATGAGT
GTAATTGAAGATGTTGTGGGCCAGTGCGGCTATGATCTAAATAAGAGTATGGATAAGCTG
CTAGATTTGTCAGCATCAACTTTGGGAAAGCGTGATGATATTTTAGACATAGGTGTTCAG
AAATCCGTGGAGAGTCCAGATTTTGCATCAGTTGCATCGCATGAGACACCTTCAATGCAA
GATCCAACCAGCCGTTCCAAAGCAAAGAATATGACTAAAAATGGGTTCAACTTATCTAAG
AAGGAGAAGGACAGGTATGAGCTTCAGAAGGAAGTTCTACAGACATTGTTTAATGTGCCT
GCAAGACATGATGGTGTGGATGACGTGATTCGTCATGTGAGGGAAGTTGAAAAGTCTAGG
CGATTAAGCCAGTTTGTAGTGAAACCATCACAGGAGACTGTAGAACGCCAGATTCTTATC
AGGACACCACAGAGTGATGCAAAAAATGGTGAGGAGAATGAAGAAAGCTACGAAGTTCTC
CGAAAAGCTGTAAAGGAGTATTGGCTTACAATGAAAGAGTACTATAAAGCAGCTGCTGAA
GCATTTCAAAAAGGAGATCAGGTCAAGGCACACAGATTCCTGGAAGAGGGAAACTTTTTC
ATGACAAAGGCCCGAGAGACTGATGAACAATCCACTCAAAAGCTTCTTGAAAACAGTTAC
AGCAAAGAAATTGTGACTGTCGATCTTCACGATTTTGAGCCAAAGGAAGCAGTGCGCTAT
CTCAAATTTCAGTTGACATCTCTTTGTGGCATCTCCTCTATTCAATATCTCAAAATCATA
GTTGGGATCACCAATGAAGAAGCCAAAGGTATTCGGAAGCGTGTGATACTCAAACTTTTG
GAGAGGGCCTCGATAGCATGGACGGAAGAAGATAATGGCAAAGCAACTGTGATAAAAGCA
GATGAAATAGATCCAAGGAAACTGACTTTTGCTAAAAAATCAACTGTCTGA

Peptide Sequence

PEP ID

XP_016484189.1
PEP Infomation

PREDICTED: putative nuclear RNA export factor SDE5 [Nicotiana tabacum]
Sequence

MKMEAPPTVLFTDDDRKNLEQLLDVFGRVVSLDDIAAAYCKAGRDPTIAXIAGDILGDLQ
ASTSITTTSASEEKIEDSLTLTSESEFEEVGDSVTLTSESASDIHAKRAGPSSSKQKKLS
VSMGTVSSMIPRDYVTNRPLIPETSTRIKPLKLSVDDFFTSEIRDEKAPLGAAAMSETLP
GSVEEFLFKMLGDRFSLDMSVIEDVVGQCGYDLNKSMDKLLDLSASTLGKRDDILDIGVQ
KSVESPDFASVASHETPSMQDPTSRSKAKNMTKNGFNLSKKEKDRYELQKEVLQTLFNVP
ARHDGVDDVIRHVREVEKSRRLSQFVVKPSQETVERQILIRTPQSDAKNGEENEESYEVL
RKAVKEYWLTMKEYYKAAAEAFQKGDQVKAHRFLEEGNFFMTKARETDEQSTQKLLENSY
SKEIVTVDLHDFEPKEAVRYLKFQLTSLCGISSIQYLKIIVGITNEEAKGIRKRVILKLL
ERASIAWTEEDNGKATVIKADEIDPRKLTFAKKSTV

Transcript Sequence

Gene sequence data has not been registered.